Browse of TCMCG073C29619 protein

CDS

Accession Number	TCMCG073C29619
gbkey	CDS
Protein Id	XP_010555627.1
Location	join(551232..551560,551676..551822,552129..552282,552494..552629,553096..553241,553548..553643,553779..553831,554022..554153,554367..554418,554528..554647,554857..554988,555351..555479,555668..555745,556159..556299,556414..556508,556705..556901,557498..558270,558453..558533,558652..558717,558846..558923,559036..559266,559488..559619,559759..559935,560064..560249,560740..561101,561217..561331)
Gene	LOC104825074
GeneID	104825074
Organism	Tarenaya hassleriana

Protein

Length	1445aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA268022
db_source	XM_010557325.2
Definition	PREDICTED: cleavage and polyadenylation specificity factor subunit 1 [Tarenaya hassleriana]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Cleavage and polyadenylation specificity factor
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K14401        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03015        [VIEW IN KEGG] map03015        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006378        [VIEW IN EMBL-EBI] GO:0006379        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0031123        [VIEW IN EMBL-EBI] GO:0031124        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043631        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0090305        [VIEW IN EMBL-EBI] GO:0090501        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAGTTTCGCGGCCTTCAAGATGATGCATTGCCCGACCGGCGTCGAGAACTGCGCTTCCGGCTACATCACCCACTCACGCGCCGACTCGGCTCCTCAGATTCCGGCGATTCCCGCCGATGAACTCGAGGCGGAGTGGCCCTCATCCAAGCGCGGCATCGGGGCCGTGCCCAATCTCGTTGTCTCTGCCGGGAATGTACTTGAGGTGTACGTCGTTAGGGTTCAGGAGGAAGGAAACGGTCAGGAGCTGAAGAACCCGAGGCATGCTAAGCGCGGCGGAGTCATGGACGGTGTTTCCGGCGTCTCTCTCGAGCTCGTTTGCCACTACAGATTGCATGGTAATGTCGAGTCAATTGCGGTGCTACCCATGGGGGGCGGCAATGGTTCTAAGGGAAGAGATTCTATCGTGATGGCTTTTCGCGACGCCAAAATTTCAGTTCTTGAATTTGATGATTCGATTCACGGTCTTCGAACTATCTCGATGCACTGTTTTGAGGGTCCAGAATGGCTTCATCTGAAAAGAGGAAGAGAGTCATTTGCACGAGGCCCATCGGTAAGCGTGGATCCTCAAGGCAGGTGTGGCGGTGTTCTTGTTTACGGTTTGCAGATGATAATACTGAAGTCTTCTCAGGTTGGCTCTGTGTTAGTTGGAGATGATGATGCTTTCAGTTCCGGGGGGGCAGTTTCTGCTCGCTTTGAGTCGTCATATATAATTAACTTGCGAGATTTGGACATGAAACATGTAAAAGATTTTGTTTTTCTACACGGATATATTGAGCCTGTAATTGTCATCCTTCACGAGGGAGAGCATACCTGGGCTGGGCGTGTTTCATGGAAGCAGCATACTTGCATGCTTTCAGCCCTTAGTATCAATACGACATTGAAACAGCACCCCGTCATATGGTCAGCTGCTAATCTGCCACATGATGCCTACAAAATACTTGCGGTGCCATCTCCAATCGGGGGTGTTCTGGTTTTGAGTGCAAACACAATCCATTATCACAGTCAGTCAGCTTCGTGTGCTCTGGCACTGAACAATTATGCCGCTTCATTTGATAGCAGTCAAGACTTGCCTAGATCAAATTTCAGTGTGGAACTGGATGCTGCCCGTGCAACATGGATATCAAACGATGTAGCCTTGTTGTCAACAAAAACTGGGGAATTGCTGCTGTTGACTCTTATTTATGATGGGCGTGTTGTACAGAGACTTGATCTTTCGAAATCAAAAGCTTCTGTGCTTACTTCGGACATTAGTAGTGTTGGAAGCTCCCTGTTCTTTCTAGGTAGCAGGCTGGGAGACAGTTTACTCGTGCAGTATTCCTGTCGGTCTGGAGGCCCAGCATCATTACCTGGTCTAAAAGATGAGTGTGACGATATTGAAGGTGATGGTCATCAAGCAAAACGTTTACGGATGTCTTCAGAAACATTTCAAGATACAATTGGTGGTGAAGAGCTTTCATTGTATGGTTCAGCTGCAAATAACTCTGATTCAGCGCAGAAATCATTTTCATTCGCAGTGAGGGATTCACTAGTTAATGTTGGTCCAGTGAAAGATTTTGCATATGGCTTAAGGATCAGTGCTGATGCAAATGCCACTGGGATTTCCAAACAGAGCAATTATGAATTGGTGTGCTGTTCAGGTCATGGGAAGAATGGCTCTTTATGTGTTCTTCGGCAGTCAATTAGACCAGAAATGATAACTGAGGTTGAACTCCCAGGCTGCAAAGGAATATGGACAGTTTATCACAAGAGTTCTCGTGGTCATAATGTTGATTCTTCTAAAGTGGCTGCTGATGAAGATGAATATCATGCTTATTTGATTATAAGCTTGGAAAATCGCACAATGGTTCTTGAAACTGCCGACCTTCTCACAGAAGTCACTGAAACTGTGGACTATTATGTTCAGGGAAGAACAGTTGCCGCTGGGAACTTGTTTGGAAGGCGCCGGGTTATTCAAGTCTTTGAACATGGTGCTCGCATTCTGGATGGTTCTTTTATGACTCAAGAGTTAAGCTTTGGAGCTCCTAACTCAGAATCCAGTTCTGGTTCTGAAAGTTCCACAGTCTCATCTGTTTCAATTGCTGATCCATATGTCTTACTTAGAATGACAGATGACAGTATCCGGCTGCTTATTGGAGATCCTTCTACTTGTACGGTATCCATAAGTAGTCCAGCTATACTTGAAAGCTCCAAAAAGAAGATATCTGCCTGTACTTTGTACCACGATAAAGGCCTTGAGCCTTGGCTACGGAAAGCAAGCACTGATGCATGGCTTTCTTCTGGAGTTGGAGAGGCCATTGATGGTGGTGATGGTGGACCACAAGATCAGGGTGACATATACTGTGTTCTCTGTTATGAAACTGGCGCTCTTGAGATATTTGATGTGTTCGGTTTTAGTTGTGTTTTCTCTGTTGATAAATTTGCATCTGGAAGAACCCACCTCTATGATATGCCTATTCAAGAATCAGAGTCCGAGCTCGACAAAACCTCGGAGGGTGGTGCTGCCACTAGGAAAGATAATATTCAGAAAACAAAAGTTGTTGAGGTATCTATGCAGAGATGGTCGGGGAATCATACTCGTCCTTTCCTTTTTGCAATATTGGCCGATGGCACCATTCTCTGTTACCATGCGTTCCTGTATGAGGGTGTTGATGGTACTAAAGCTGAGAACCCTGTTTCCTTGCCAAACCCTGTTGGCCTAAATGCTTCTTCTGGTGCTTCTAAGCTTAGAAATCTGAAGTTTCTCCGTATTCCCTTGGACACATTCACAAGAGAGGAGGCTTCAAATGGAGTTTTAGCCCAAAGAATTACCATGTTCAAGAACATTAGTGGTCACCAAGGGTTTTTCCTTTCTGGTTCAAGACCTGGATGGTGTATGTTGTTCAGAGAGCGGCTTCGATTTCATCCGCAGCTATGTGATGGGTCAATTGTGGCCTTCACGGTCCTCCACAACGTGAATTGCAATCGCGGGTTCATATATGTTACATCACAGGGAATTTTGAAGATTTGCCAACTTCCTTCTGCATCAATCTACGATAATTATTGGCCAGTACAGAAAGTTCCTCTTAAGGCTACGCCTCATCAAGTTACATACTACTCTGAGAAGAATCTGTATCCAATCATAGTATCTTTTCCTGTTAACAAGTCATTAAATCAAGTGATGTCTTCACTAGTTGATCAAGAAGCTGGCCAGCAGATGGACAGTCATAATCTAAGTTCCGAAGACCTCCAAAGGACTTACACTGTGGATGAATACGAAATTCGGATTATGGAACCGGAAAGAAGTGGTGGGCCTTGGGAAACTAAAGCCACTATTCCAATGCAGAGTTCAGAAAATGCACTGACCGTGCGCGTTGTCACACTTCTTAACGTGACAACGAAAGAGAATGAGACACTTCTGGCTGCTGGAACCGCTTATGTGCAAGGAGAGGATGTTGCTGCGAGGGGCCGTGTGCTTCTATTCTCAATTGGAAGGAACGATGATAACTCTCAGAATTTGGTTTCGGAAGTCTACTCGAAGGAGCTAAAAGGTGCGATATCGGCTGTAGCCTCGATTCAGGGTCATCTTCTAATAGCGTCTGGTCCTAAAATCATCTTGCACAAATGGAATGGCACCGAGTTAAACGGTGTCGCCTTCTATGATGCTCCTCCCCTCTACGTCGTGAGCATGAATATCGTGAAGAATTTCATCCTCCTTGGTGATGTTCACAAAAGCATATATTTTCTTAGTTGGAAGGAACAAGGTTCCCAGCTTAACTTACTGGCCAAGGATTTCGGGTCCCTTGATTGTTTTGCTTCAGAGTTTTTGATTGATGGAAGTACTCTCAGCTTGGCAGTCTCTGATGAGCAGAAGAACATTCAGATATTCTATTATGCACCGAGGATGTCTGAGAGTTGGAAAGGGCAGAAACTTCTATCGAGGGCAGAGTTTCACGTCGGTGCCCACGTGACGAAGTTCTTGCGTCTGCAGATGGTTGTATCTCCGGGCGCTGATAAGACAAATCGGTTCGCGTTGTTGTTCGGTACCTTAGATGGAAGTTTCGGGTGTGTTGCCCCGCTCGATGAGCTCACCTTCCGTAGGCTTCAGACTCTACAGAAAAAGCTCGTGGATGCTGTTCCTCATGTAGCAGGTTTGAACCCGCGTTCTTTCCGACAGTTCCACTCGAGTGGTAAAGCTCGGCGGCCAGGCCCTGACAGCGTAATTGACTGTGAGCTACTCAGCCATTATGAGATGCTGCCATTGGAGGAACAGCTTGAGCTTGCTAACCAGATTGGAACTACCCGTTCTCAGATTCTCTCTAACCTCATCGACCTTTCTGTCGGAACAAGCTTCTTTTAG

Protein:   MSFAAFKMMHCPTGVENCASGYITHSRADSAPQIPAIPADELEAEWPSSKRGIGAVPNLVVSAGNVLEVYVVRVQEEGNGQELKNPRHAKRGGVMDGVSGVSLELVCHYRLHGNVESIAVLPMGGGNGSKGRDSIVMAFRDAKISVLEFDDSIHGLRTISMHCFEGPEWLHLKRGRESFARGPSVSVDPQGRCGGVLVYGLQMIILKSSQVGSVLVGDDDAFSSGGAVSARFESSYIINLRDLDMKHVKDFVFLHGYIEPVIVILHEGEHTWAGRVSWKQHTCMLSALSINTTLKQHPVIWSAANLPHDAYKILAVPSPIGGVLVLSANTIHYHSQSASCALALNNYAASFDSSQDLPRSNFSVELDAARATWISNDVALLSTKTGELLLLTLIYDGRVVQRLDLSKSKASVLTSDISSVGSSLFFLGSRLGDSLLVQYSCRSGGPASLPGLKDECDDIEGDGHQAKRLRMSSETFQDTIGGEELSLYGSAANNSDSAQKSFSFAVRDSLVNVGPVKDFAYGLRISADANATGISKQSNYELVCCSGHGKNGSLCVLRQSIRPEMITEVELPGCKGIWTVYHKSSRGHNVDSSKVAADEDEYHAYLIISLENRTMVLETADLLTEVTETVDYYVQGRTVAAGNLFGRRRVIQVFEHGARILDGSFMTQELSFGAPNSESSSGSESSTVSSVSIADPYVLLRMTDDSIRLLIGDPSTCTVSISSPAILESSKKKISACTLYHDKGLEPWLRKASTDAWLSSGVGEAIDGGDGGPQDQGDIYCVLCYETGALEIFDVFGFSCVFSVDKFASGRTHLYDMPIQESESELDKTSEGGAATRKDNIQKTKVVEVSMQRWSGNHTRPFLFAILADGTILCYHAFLYEGVDGTKAENPVSLPNPVGLNASSGASKLRNLKFLRIPLDTFTREEASNGVLAQRITMFKNISGHQGFFLSGSRPGWCMLFRERLRFHPQLCDGSIVAFTVLHNVNCNRGFIYVTSQGILKICQLPSASIYDNYWPVQKVPLKATPHQVTYYSEKNLYPIIVSFPVNKSLNQVMSSLVDQEAGQQMDSHNLSSEDLQRTYTVDEYEIRIMEPERSGGPWETKATIPMQSSENALTVRVVTLLNVTTKENETLLAAGTAYVQGEDVAARGRVLLFSIGRNDDNSQNLVSEVYSKELKGAISAVASIQGHLLIASGPKIILHKWNGTELNGVAFYDAPPLYVVSMNIVKNFILLGDVHKSIYFLSWKEQGSQLNLLAKDFGSLDCFASEFLIDGSTLSLAVSDEQKNIQIFYYAPRMSESWKGQKLLSRAEFHVGAHVTKFLRLQMVVSPGADKTNRFALLFGTLDGSFGCVAPLDELTFRRLQTLQKKLVDAVPHVAGLNPRSFRQFHSSGKARRPGPDSVIDCELLSHYEMLPLEEQLELANQIGTTRSQILSNLIDLSVGTSFF